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Undefined subroutine &RUM::Script::Indexes::isdigit

Status: Open.

#190 In itmat/rum;

· rashidma opened on Dec 30, 2021

RUM and Bowtie2

Status: Open.

#188 In itmat/rum;

· katharinedickson opened on Nov 30, 2018

rum_runner says it uses a default --prefix, but it doesn't

Status: Open.

#187 In itmat/rum;

· amirkarger opened on Aug 12, 2015

make test fails on several files due to "unsorted output"

Status: Open.

#186 In itmat/rum;

· amirkarger opened on Aug 11, 2015

Test failed: merge-gnu-and-tnu-and-cnu.t & rum-to-sam.t

Status: Open.

#185 In itmat/rum;

· hwlim opened on Mar 8, 2015

Test failed: merge-gnu-and-tnu-and-cnu.t & rum-to-sam.t

Status: Open.

#184 In itmat/rum;

· hwlim opened on Mar 8, 2015

Unbundle mdust, blat and bowtie from the package

Status: Open.

#183 In itmat/rum;

· mmokrejs opened on Jun 23, 2014

rum-2.0.5_05: Warning: the following files are missing in your kit: lib/RUM/Script/QuantifyExons.pm

Status: Open.

#182 In itmat/rum;

· mmokrejs opened on Jun 23, 2014

Corrupt line from RUM_NU

Status: Open.

#181 In itmat/rum;

· audreymannion opened on Apr 24, 2014

Proper sam formating

bug

sam

Status: Open.

#180 In itmat/rum;

· choishingwan opened on Feb 12, 2014

LSF cluster

Status: Open.

#178 In itmat/rum;

· khayer opened on Oct 11, 2013

Novel and known introns with same coordinates

Status: Open.

#177 In itmat/rum;

· ryanames opened on Aug 12, 2013