Genome-scale metabolic model of Methylococcus capsulatus.
Methods and data to reproduce the investigation on the adaptive trait found in the genes of the methane oxidation metabolic module of type Ia methanotrophs
Prokaryote Gene Regulatory Network (ProGRN) Inference Pipeline
Methanoperedens nitroreducens genome-scale metabolic model.
iJV803: a genome-scale metabolic model for Methylomicrobium album BG8
🌲 16S rRNA amplicon sequencing analyses of methane-oxidizing community dynamics in forest soils (Beals et al. 2024).
🗨️ Metatranscriptomic analysis of quorum sensing gene expression in methane-fed microbial communities from Lake Washington.
🧬 RNA-seq differential expression analysis of a methanotroph across a methane-oxygen counter gradient (Beals & Puri 2024).
🔗 RB-TnSeq gene fitness profiling of microbial interactions in methanotroph–methylotroph co-culture.
🔍 Integrated metagenomic and metatranscriptomic analyses supporting methylocystabactin discovery (Robes et al. 2025).
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