Merge pull request #1355 from su2code/develop

update master

Author: pcarruscag

.github/workflows/regression.yml

@@ -16,7 +16,7 @@ jobs:
     strategy:
       fail-fast: false
       matrix: 
-        config_set: [BaseMPI, ReverseMPI, ForwardMPI, BaseNoMPI, ReverseNoMPI, ForwardNoMPI, BaseOMP]
+        config_set: [BaseMPI, ReverseMPI, ForwardMPI, BaseNoMPI, ReverseNoMPI, ForwardNoMPI, BaseOMP, ReverseOMP, ForwardOMP]
         include:
           - config_set: BaseMPI
             flags: '-Denable-pywrapper=true -Denable-tests=true --warnlevel=3 --werror'
@@ -32,6 +32,10 @@ jobs:
             flags: '-Denable-directdiff=true -Denable-normal=false -Dwith-mpi=disabled -Denable-tests=true --warnlevel=3 --werror'
           - config_set: BaseOMP
             flags: '-Dwith-omp=true -Denable-mixedprec=true -Denable-tecio=false --warnlevel=3 --werror'
+          - config_set: ReverseOMP
+            flags: '-Denable-autodiff=true -Denable-normal=false -Dwith-omp=true -Denable-mixedprec=true -Denable-tecio=false --warnlevel=3 --werror'
+          - config_set: ForwardOMP
+            flags: '-Denable-directdiff=true -Denable-normal=false -Dwith-omp=true -Denable-mixedprec=true -Denable-tecio=false --warnlevel=3 --werror'
     runs-on: ubuntu-latest
     steps:
       - name: Cache Object Files
@@ -56,7 +60,7 @@ jobs:
     strategy:
       fail-fast: false
       matrix: 
-        testscript: ['tutorials.py', 'parallel_regression.py', 'parallel_regression_AD.py', 'serial_regression.py', 'serial_regression_AD.py', 'hybrid_regression.py']
+        testscript: ['tutorials.py', 'parallel_regression.py', 'parallel_regression_AD.py', 'serial_regression.py', 'serial_regression_AD.py', 'hybrid_regression.py', 'hybrid_regression_AD.py']
         include:
           - testscript: 'tutorials.py'
             tag: MPI
@@ -70,6 +74,8 @@ jobs:
             tag: NoMPI
           - testscript: 'hybrid_regression.py'
             tag: OMP
+          - testscript: 'hybrid_regression_AD.py'
+            tag: OMP
     steps:
       - name: Download All artifact
         uses: actions/download-artifact@v2
@@ -83,6 +89,7 @@ jobs:
       - name: Run Tests in Container
         uses: docker://su2code/test-su2:20200303
         with:
+          # -t <Tutorials-branch> -c <Testcases-branch>
           args: -b ${{github.ref}} -t develop -c develop -s ${{matrix.testscript}}
   unit_tests:
     runs-on: ubuntu-latest

.gitignore

@@ -94,3 +94,6 @@ build/
 
 # ninja binary (build system)
 ninja
+
+# Ignore vscode folder
+.vscode/

.gitmodules

@@ -15,3 +15,6 @@
 [submodule "subprojects/Mutationpp"]
         path = subprojects/Mutationpp
         url = https://github.com/mutationpp/Mutationpp.git	
+[submodule "externals/opdi"]
+	path = externals/opdi
+	url = https://github.com/SciCompKL/OpDiLib

.lgtm.yml

@@ -0,0 +1,7 @@
+path_classifiers:
+  test:
+    - TestCases/*
+  library:
+    - externals/*
+  legacy:
+    - preconfigure.py

Common/doc/docmain.hpp

@@ -2,7 +2,7 @@
  * \file docmain.hpp
  * \brief This file contains documentation for Doxygen and does not have any significance with respect to C++.
  * \author F. Palacios
- * \version 7.1.1 "Blackbird"
+ * \version 7.2.0 "Blackbird"
  *
  * The current SU2 release has been coordinated by the
  * SU2 International Developers Society <www.su2devsociety.org>
@@ -15,7 +15,7 @@
  *  - Prof. Edwin van der Weide's group at the University of Twente.
  *  - Prof. Vincent Terrapon's group at the University of Liege.
  *
- * Copyright 2012-2020, Francisco D. Palacios, Thomas D. Economon,
+ * Copyright 2012-2021, Francisco D. Palacios, Thomas D. Economon,
  *                      Tim Albring, and the SU2 contributors.
  *
  * SU2 is free software; you can redistribute it and/or
@@ -33,7 +33,7 @@
  */
 
 /*! 
- * \mainpage SU2 version 7.1.1 "Blackbird"
+ * \mainpage SU2 version 7.2.0 "Blackbird"
  * SU2 suite is an open-source collection of C++ based software tools
  * to perform PDE analysis and PDE constrained optimization problems.  The toolset is designed with 
  * computational fluid dynamics and aerodynamic shape optimization in mind, but is extensible to

Common/include/CConfig.hpp

@@ -2,14 +2,14 @@
  * \file CADTBaseClass.hpp
  * \brief Base class for storing an ADT in an arbitrary number of dimensions.
  * \author E. van der Weide
- * \version 7.1.1 "Blackbird"
+ * \version 7.2.0 "Blackbird"
  *
  * SU2 Project Website: https://su2code.github.io
  *
  * The SU2 Project is maintained by the SU2 Foundation
  * (http://su2foundation.org)
  *
- * Copyright 2012-2020, SU2 Contributors (cf. AUTHORS.md)
+ * Copyright 2012-2021, SU2 Contributors (cf. AUTHORS.md)
  *
  * SU2 is free software; you can redistribute it and/or
  * modify it under the terms of the GNU Lesser General Public

Common/include/adt/CADTBaseClass.hpp

@@ -2,14 +2,14 @@
  * \file CADTComparePointClass.hpp
  * \brief subroutines for comparing two points in an alternating digital tree (ADT).
  * \author E. van der Weide
- * \version 7.1.1 "Blackbird"
+ * \version 7.2.0 "Blackbird"
  *
  * SU2 Project Website: https://su2code.github.io
  *
  * The SU2 Project is maintained by the SU2 Foundation
  * (http://su2foundation.org)
  *
- * Copyright 2012-2020, SU2 Contributors (cf. AUTHORS.md)
+ * Copyright 2012-2021, SU2 Contributors (cf. AUTHORS.md)
  *
  * SU2 is free software; you can redistribute it and/or
  * modify it under the terms of the GNU Lesser General Public

Common/include/adt/CADTComparePointClass.hpp

@@ -2,14 +2,14 @@
  * \file CADTElemClass.hpp
  * \brief Class for storing an ADT of (linear) elements in an arbitrary number of dimensions.
  * \author E. van der Weide
- * \version 7.1.1 "Blackbird"
+ * \version 7.2.0 "Blackbird"
  *
  * SU2 Project Website: https://su2code.github.io
  *
  * The SU2 Project is maintained by the SU2 Foundation
  * (http://su2foundation.org)
  *
- * Copyright 2012-2020, SU2 Contributors (cf. AUTHORS.md)
+ * Copyright 2012-2021, SU2 Contributors (cf. AUTHORS.md)
  *
  * SU2 is free software; you can redistribute it and/or
  * modify it under the terms of the GNU Lesser General Public
@@ -35,7 +35,7 @@
  * \class CADTElemClass
  * \brief  Class for storing an ADT of (linear) elements in an arbitrary number of dimensions.
  * \author E. van der Weide
- * \version 7.1.1 "Blackbird"
+ * \version 7.2.0 "Blackbird"
  */
 class CADTElemClass : public CADTBaseClass {
 private:
@@ -400,4 +400,4 @@ class CADTElemClass : public CADTBaseClass {
    */
   CADTElemClass() = delete;
 
-};
+};

Common/include/adt/CADTElemClass.hpp

@@ -2,14 +2,14 @@
  * \file CADTNodeClass.hpp
  * \brief Class for storing the information needed in a node of an ADT.
  * \author E. van der Weide
- * \version 7.1.1 "Blackbird"
+ * \version 7.2.0 "Blackbird"
  *
  * SU2 Project Website: https://su2code.github.io
  *
  * The SU2 Project is maintained by the SU2 Foundation
  * (http://su2foundation.org)
  *
- * Copyright 2012-2020, SU2 Contributors (cf. AUTHORS.md)
+ * Copyright 2012-2021, SU2 Contributors (cf. AUTHORS.md)
  *
  * SU2 is free software; you can redistribute it and/or
  * modify it under the terms of the GNU Lesser General Public