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Add missing lumbar sct_qc command
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single_subject/batch_single_subject.sh

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@@ -232,6 +232,9 @@ sct_deepseg sc_lumbar_t2 -i t2_lumbar.nii.gz -qc ~/qc_singleSubj
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# sake of reproducing the results in the tutorial.
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sct_label_utils -i t2_lumbar.nii.gz -create 27,76,187,17:27,79,80,60 -o t2_lumbar_labels.nii.gz -qc ~/qc_singleSubj
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# generate a QC report for the lumbar labels
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sct_qc -i t2_lumbar.nii.gz -s t2_lumbar_labels.nii.gz -p sct_label_utils -qc ~/qc_singleSubj
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# Register the image to the template using segmentation and labels
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sct_register_to_template -i t2_lumbar.nii.gz -s t2_lumbar_seg.nii.gz -ldisc t2_lumbar_labels.nii.gz -c t2 -qc ~/qc_singleSubj -param step=1,type=seg,algo=centermassrot:step=2,type=seg,algo=bsplinesyn,metric=MeanSquares,iter=3,slicewise=0:step=3,type=im,algo=syn,metric=CC,iter=3,slicewise=0
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