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    8 repositories

    • vision

      Public
      Variation Identification System to Improve Outcomes in Nanopore (V.I.S.I.O.N)
      MIT License
      •0•0•0•0•Updated Nov 14, 2018Nov 14, 2018

    • FRIDAY

      Public
      Translation based variant caller
      Python
      •
      MIT License
      •0•5•0•0•Updated Oct 12, 2018Oct 12, 2018

    • preprocessing

      Public
      Data pre-processing pipeline for VISION genome variant caller. Pre-processes fastq files into analysis ready bams based on gatk best practices workflow
      0•0•0•0•Updated Sep 21, 2018Sep 21, 2018

    • friday_cpp

      Public
      FRIDAY implemented in C++
      C++
      •
      MIT License
      •0•0•0•0•Updated Jul 7, 2018Jul 7, 2018

    • alleleSelector

      Public archive
      nanoporegenome-alignment
      nanoporegenome-alignment
      Python
      •0•1•0•0•Updated Apr 5, 2018Apr 5, 2018

    • deePore

      Public archive
      Deep learning based nanopore variant caller
      Python
      •
      MIT License
      •1•0•0•2•Updated Mar 2, 2018Mar 2, 2018

    • genomePileup

      Public archive
      Python
      •
      MIT License
      •0•0•0•0•Updated Mar 2, 2018Mar 2, 2018

    • KalleR

      Public archive
      Deep neural network based variant caller
      Python
      •
      MIT License
      •0•0•0•0•Updated Feb 27, 2018Feb 27, 2018
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