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Meren Lab

79 followers
Germany
http://merenlab.org
meren@hifmb.de

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anvio anvio Public

An analysis and visualization platform for 'omics data

Python 512 157
oligotyping oligotyping Public

Exploring microbial patterns through subtle nucleotide variation within 16S rRNA gene tag sequences of closely related taxa

Python 41 18
illumina-utils illumina-utils Public

A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).

Python 95 31

Repositories

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Showing 10 of 25 repositories

merenlab.org Public
Web content for Meren Lab

merenlab/merenlab.org’s past year of commit activity

HTML 11 MIT 31 2 2 Updated Apr 16, 2026
data-availability-checklist Public
A data-conscious checklist for the reviewers of 'omics studies who champion open science

merenlab/data-availability-checklist’s past year of commit activity

2 CC0-1.0 0 0 0 Updated Apr 15, 2026
anvio.org Public
The anvi'o community web page

merenlab/anvio.org’s past year of commit activity

HTML 6 14 3 1 Updated Apr 14, 2026
anvio Public
An analysis and visualization platform for 'omics data

merenlab/anvio’s past year of commit activity

Python 512 GPL-3.0 157 179 10 Updated Apr 14, 2026
hifmb-displays Public
A tiny codebase to deal with the displays at the HIFMB foyer

merenlab/hifmb-displays’s past year of commit activity

HTML 0 0 0 0 Updated Mar 29, 2026
world-map-r Public
A simple script to display stuff on a world map with R and ggplot

merenlab/world-map-r’s past year of commit activity

R 17 GPL-3.0 4 1 0 Updated Feb 17, 2026
clusterize Public Forked from ekiefl/clusterize
The most basic SLURM wrapper

merenlab/clusterize’s past year of commit activity

Python 1 MIT 2 0 0 Updated Feb 12, 2026
rosalind Public
A simple Meren Lab bot to notify our Slack regarding our jobs on the HPC System ROSA at UOL

merenlab/rosalind’s past year of commit activity

Python 0 0 0 0 Updated Dec 21, 2025
illumina-utils Public
A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).

merenlab/illumina-utils’s past year of commit activity

Python 95 GPL-2.0 31 7 0 Updated Nov 24, 2025
scholarly-report Public
A few tools to generate reports for a bunch of scientists using their Google Scholar profiles.

merenlab/scholarly-report’s past year of commit activity

Python 0 GPL-3.0 0 0 0 Updated Oct 12, 2025

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