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Pull requests: GoekeLab/bambu

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Pull requests list

Implement opt.rcAssignment
#568 opened Apr 16, 2026 by SuiYue-2308 Collaborator Loading…
5 of 11 tasks
1
18
Added functionality for writeBambuOutput() to write to gff3
#567 opened Apr 16, 2026 by hafiz-ismail Collaborator Loading…
8 of 11 tasks
1
@jonathangoeke @cying111
8
Tidy readClassList and quantData
#565 opened Apr 16, 2026 by lingminhao Collaborator Loading…
6 of 11 tasks
1
27
Single cell wrapper and removal of barcodesToFilter, sampleName, cleanReads
#561 opened Apr 16, 2026 by ch99l Collaborator Loading…
5 of 10 tasks
1
17
fix: adjust NDR threshold behavior. Previously, NDR = 1 would overrid…
#559 opened Apr 15, 2026 by SuiYue-2308 Collaborator Loading…
5 tasks done
1
11
Summarise by exon
#558 opened Apr 15, 2026 by ch99l Collaborator Loading…
5 of 11 tasks
1
8
fix: handle single-level factors in sparse.model.matrix
#550 opened Mar 23, 2026 by lingminhao Collaborator Loading…
Bump version to 3.13.2 and update author emails
#538 opened Feb 2, 2026 by cying111 Collaborator Loading…
1
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