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fix rc assignment bug (multi-sample bambu-sc)
1 parent 4725911 commit 69d2bf8

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Lines changed: 2 additions & 2 deletions

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R/bambu-processReads.R

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -88,9 +88,9 @@ bambu.processReads <- function(reads, annotations, genomeSequence,
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readGrgList <- do.call(c, readGrgList)
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mcols(readGrgList)$id <- seq_along(readGrgList)
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if(!isFALSE(demultiplexed)){
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mcols(readGrgList[[i]])$sampleID <- as.numeric(mcols(readGrgList[[i]])$BC)
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mcols(readGrgList)$sampleID <- as.numeric(mcols(readGrgList)$BC)
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} else {
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mcols(readGrgList[[i]])$sampleID <- i
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mcols(readGrgList)$sampleID <- i
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}
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readClassList <- constructReadClasses(readGrgList, genomeSequence = genomeSequence,annotations = annotations,
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stranded = stranded, min.readCount = min.readCount,

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