Skip to content

Commit 44e791d

Browse files
committed
correct order of extracted barcode to match devel_pre_v4
1 parent 807ad06 commit 44e791d

1 file changed

Lines changed: 3 additions & 2 deletions

File tree

R/bambu-processReads.R

Lines changed: 3 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -214,10 +214,11 @@ bambu.processReadsByFile <- function(bam.file, genomeSequence, annotations,
214214
verbose = verbose)
215215

216216
if (demultiplexed) {
217+
barcodes <- levels(mcols(readGrgList)$CB)
217218
metadata(se)$sampleData <- tibble(
218-
id = paste(names(bam.file)[1], levels(mcols(readGrgList)$CB), sep = '_'),
219+
id = paste(names(bam.file)[1], barcodes, sep = '_'),
219220
sampleName = names(bam.file)[1],
220-
barcode = levels(mcols(readGrgList)$CB)
221+
barcode = barcodes
221222
)
222223
} else{
223224
metadata(se)$sampleData <- tibble(

0 commit comments

Comments
 (0)