Add script for manual correction to multi-subject/ section (#6)

Author: jcohenadad

multi_subject/README.md

@@ -0,0 +1,40 @@
+
+Spinal cord analysis pipeline for the [SCT course and webpage tutorials](https://spinalcordtoolbox.com/user_section/tutorials.html).
+
+
+GETTING STARTED
+===============
+
+- Update permission by running: chmod 775 process_data.sh
+- Run:
+  ```
+  sct_run_batch -script process_data.sh -path-data data/ -path-output output -jobs 3
+  ```
+- Check QC report (under output/qc/index.html) and output/results/
+
+
+DATA
+====
+
+The data are from the Spinal Cord MRI Public Database (site: unf).
+
+The file structure follows the BIDS convention:
+
+data
+ |- subj-01
+ |- subj-03
+ |- subj-05
+    |- anat
+       |- sub-05_T2w.nii.gz
+       |- sub-05_acq-MTon_MTS.nii.gz
+       |- sub-05_acq-MToff_MTS.nii.gz
+
+
+SCT VERSION
+===========
+
+This pipeline has been tested on 5.4, which can be downloaded here:
+https://github.com/spinalcordtoolbox/spinalcordtoolbox/releases
+
+Also see SCT installation instructions:
+https://spinalcordtoolbox.com/user_section/installation.html