Repositories list

• yeast_phospho

  Public
  Downstream analysis of the yeast phosphorylation build.

  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 20, 2026Mar 20, 2026

• ULP_identification_rice

  Public
  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jan 16, 2026Jan 16, 2026

• PanOryza-pan-genes-release-v1.0

  Public
  R

  •

  Apache License 2.0

  •11 fork•11 star•00 issues•00 pull requests•Updated Sep 17, 2025Sep 17, 2025

• Human-SUMO-Analysis

  Public
  Scripts and example input files supporting the human SUMO build manuscript.

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 11, 2025Sep 11, 2025

• RNAseq_CoEx

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated May 27, 2025May 27, 2025

• mzidFLR

  Public
  Python

  •11 fork•33 stars•11 issue•00 pull requests•Updated Apr 10, 2025Apr 10, 2025

• Rice_Phospho_Manuscript

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 23, 2024Feb 23, 2024

• tameNMR-PhenoMeNal

  Public
  tameNMR version for PhenoMeNal project

  R

  •

  GNU General Public License v3.0

  •11 fork•00 stars•00 issues•11 pull request•Updated Oct 25, 2022Oct 25, 2022

• MaxQuantHPC

  Public
  C#

  •00 forks•11 star•00 issues•11 pull request•Updated Jun 23, 2022Jun 23, 2022

• mzidlib

  Public
  MzidLib - A library of routines for manipulating data in the PSI's mzIdentML standard.

  Java

  •

  Other

  •1212 forks•88 stars•44 issues•00 pull requests•Updated May 11, 2022May 11, 2022

• PhosphoFLR

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 14, 2022Apr 14, 2022

• php-ms-example

  Public
  php-ms demo suite and examples of usage.

  PHP

  •

  Apache License 2.0

  •00 forks•11 star•00 issues•00 pull requests•Updated Feb 4, 2022Feb 4, 2022

• lcmsWorld

  Public
  lcmsWorld

  C

  •

  GNU Affero General Public License v3.0

  •00 forks•55 stars•22 issues•00 pull requests•Updated Nov 23, 2021Nov 23, 2021

• MHCVision

  Public
  FDR/PEP estimation for MHC-peptide binding prediction

  Python

  •00 forks•11 star•00 issues•00 pull requests•Updated Nov 12, 2021Nov 12, 2021

• MHCVision-RF

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 12, 2021Nov 12, 2021

• tameNMR

  Public
  Tools for Analysis of Metabolomic NMR

  HTML

  •33 forks•22 stars•00 issues•00 pull requests•Updated Sep 3, 2021Sep 3, 2021

• Classifying-disease-state-in-high-dimensional-data

  Public
  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 23, 2020Nov 23, 2020

• JonesSDC3PhosphoproteomicsPaper

  Public
  Julia

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 14, 2020Oct 14, 2020

• mzqLibrary

  Public
  Java

  •00 forks•00 stars•00 issues•11 pull request•Updated Oct 13, 2020Oct 13, 2020

• php-ms

  Public
  PHP Mass Spectrometry utility classes

  phpbioinformaticsproteomics+ 2

  phpbioinformaticsproteomicsmass-spectrometrylcms

  PHP

  •

  Apache License 2.0

  •00 forks•22 stars•00 issues•00 pull requests•Updated Jun 15, 2020Jun 15, 2020

• crowdsource-server

  Public
  Crowd Sourcing - Server Side

  PHP

  •

  Apache License 2.0

  •00 forks•11 star•00 issues•00 pull requests•Updated Aug 2, 2019Aug 2, 2019

• VAPPER

  Public
  Variant Antigen Profiling for Trypanosoma congolense and Trypanosoma vivax

  Python

  •00 forks•22 stars•00 issues•00 pull requests•Updated Jun 10, 2019Jun 10, 2019

• crowdsource-js

  Public
  Crowd Sourcing - Javascript client

  JavaScript

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 31, 2019May 31, 2019

• phpMs-TopDown

  Public
  Top down data processor using phpMs library

  PHP

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 8, 2019Mar 8, 2019

• crowdsource-UI

  Public
  Crowd-sourcing project peptide search application UI at the University of Liverpool

  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 16, 2018Oct 16, 2018

• pxdsync

  Public
  PHP

  •

  Apache License 2.0

  •00 forks•11 star•00 issues•00 pull requests•Updated Oct 27, 2017Oct 27, 2017

• proteingrouping

  Public
  Java

  •

  Apache License 2.0

  •00 forks•00 stars•33 issues•00 pull requests•Updated May 2, 2017May 2, 2017

• mascot-monitor

  Public
  PHP

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 30, 2017Mar 30, 2017

• neo-pep-tool

  Public
  Neopeptide Analyser tool

  Java

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 28, 2017Mar 28, 2017

• psi-standard-formats-tutorial

  Public
  A tutorial for the use of PSI standard formats in Proteomics

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 16, 2017Feb 16, 2017