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Update pyproject.toml
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pyproject.toml

Lines changed: 7 additions & 17 deletions
Original file line numberDiff line numberDiff line change
@@ -1,13 +1,11 @@
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[project]
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name = "ALLCools"
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description = "Toolkit for single-cell DNA methylome and multiomic data analysis."
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authors = [
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{ name = "Hanqing Liu" },
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]
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authors = [{ name = "Hanqing Liu" }]
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maintainers = [
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{ name = "Hanqing Liu", email = "hanliu@salk.edu" },
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{ name = "Jingtian Zhou", email = "jzhou@salk.edu" },
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{ name = "Wei Tian", email = "wtian@salk.edu" }
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{ name = "Wei Tian", email = "wtian@salk.edu" },
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]
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urls.Documentation = "https://lhqing.github.io/ALLCools/intro.html"
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urls.Source = "https://github.com/lhqing/ALLCools"
@@ -34,7 +32,7 @@ dependencies = [
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dev = [
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# dev version generation
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"bump2version",
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"pre-commit"
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"pre-commit",
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]
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analysis = [
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"biopython",
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"statsmodels",
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"rpy2",
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"tpot",
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"cooler"
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]
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doc = [
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"jupyter-book",
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"ghp-import"
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]
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test = [
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"pytest",
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"pytest-cov",
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"cooler",
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]
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doc = ["jupyter-book", "ghp-import"]
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test = ["pytest", "pytest-cov"]
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[tool.coverage.run]
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source = ["ALLCools"]
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omit = [
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"**/test_*.py",
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]
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omit = ["**/test_*.py"]
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[tool.pytest.ini_options]
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testpaths = ["tests"]

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