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new page for version 3
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‎index.html‎

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layout: default
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title: "IQ-TREE: Efficient phylogenomic software by maximum likelihood"
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permalink: /
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version: 1.6.12
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version_new: 2.4.0
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releasedate: August 15, 2019
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releasedate_new: February 7, 2025
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v1_url: https://github.com/Cibiv/IQ-TREE/releases/download
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v2_url: https://github.com/iqtree/iqtree2/releases/download
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version: 2.4.0
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version_new: 3.0.0
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releasedate: February 7, 2025
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releasedate_new: April 3, 2025
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v1_url: https://github.com/iqtree/iqtree2/releases/download
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v2_url: https://github.com/iqtree/iqtree3/releases/download
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---
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<!-- ========================== HEADER ========================== -->
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<div id="headerwrap">
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<h4>Linux</h4>
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<div class="list-group">
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<a class="list-group-item list-group-item-info" href="{{page.v2_url}}/v{{page.version_new}}/iqtree-{{page.version_new}}-Linux-intel.tar.gz">64-bit Linux Intel</a>
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<a class="list-group-item list-group-item-info" href="{{page.v2_url}}/v{{page.version_new}}/iqtree-{{page.version_new}}-Linux-arm.tar.gz">64-bit Linux ARM</a>
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<a class="list-group-item list-group-item-success" href="{{page.v2_url}}/v{{page.version_new}}/iqtree-{{page.version_new}}-Linux-arm.tar.gz">64-bit Linux ARM</a>
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</div>
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</div>
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<div class="col-sm-4">
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<div class="list-group">
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<a class="list-group-item list-group-item-info" href="{{page.v1_url}}/v{{page.version}}/iqtree-{{page.version}}-Windows.zip">64-bit Windows</a>
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<a class="list-group-item list-group-item-success" href="{{page.v1_url}}/v{{page.version}}/iqtree-{{page.version}}-Windows32.zip">32-bit Windows</a>
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</div>
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</div>
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<div class="col-sm-4">
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<div class="list-group">
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<a class="list-group-item list-group-item-info" href="{{page.v1_url}}/v{{page.version}}/iqtree-{{page.version}}-MacOSX.zip">64-bit macOS</a>
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<a class="list-group-item list-group-item-info" href="{{page.v1_url}}/v{{page.version}}/iqtree-{{page.version}}-macOS.zip">64-bit macOS Universal</a>
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<a class="list-group-item list-group-item-success" href="{{page.v1_url}}/v{{page.version}}/iqtree-{{page.version}}-macOS-intel.zip">64-bit macOS Intel</a>
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<a class="list-group-item list-group-item-info" href="{{page.v1_url}}/v{{page.version}}/iqtree-{{page.version}}-macOS-arm.zip">64-bit macOS Apple M chip (ARM)</a>
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</div>
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</div>
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<div class="col-sm-4">
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<div class="list-group">
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<a class="list-group-item list-group-item-info" href="{{page.v1_url}}/v{{page.version}}/iqtree-{{page.version}}-Linux.tar.gz">64-bit Linux</a>
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<a class="list-group-item list-group-item-success" href="{{page.v1_url}}/v{{page.version}}/iqtree-{{page.version}}-Linux32.tar.gz">32-bit Linux</a>
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<a class="list-group-item list-group-item-info" href="{{page.v1_url}}/v{{page.version}}/iqtree-{{page.version}}-Linux-intel.tar.gz">64-bit Linux Intel</a>
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<a class="list-group-item list-group-item-success" href="{{page.v1_url}}/v{{page.version}}/iqtree-{{page.version}}-Linux-arm.tar.gz">64-bit Linux ARM</a>
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<!--<a class="list-group-item list-group-item-info" href="{{page.v1_url}}/v{{page.version}}/iqtree-{{page.version}}-LinuxKNL.tar.gz">Xeon Phi Knights Landing Linux</a>-->
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</div>
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</div>
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<div class="col-sm-4">
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<div class="list-group">
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<a href="release/" class="list-group-item">
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<div class="list-group-item-text"><h4>What's new?</h4>Release notes of the latest version.</div>
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<div class="list-group-item-text"><h4>Version 1</h4>Downloads and release notes of IQ-TREE 1.</div>
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</a>
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</div>
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</div>

‎release.html‎

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<div class="row">
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<!-- BLOG POSTS LIST -->
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<div class="col-md-8">
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<p><b>For IQ-TREE version 3 please refer to the <a href="https://github.com/iqtree/iqtree3/releases">GitHub release page</a>.</b>
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<p><b>For IQ-TREE version 2 please refer to the <a href="https://github.com/iqtree/iqtree2/releases">GitHub release page</a>.</b>
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Following are the release notes for version 1.
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<p>Following are the release notes for version 1.
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</p>
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{% assign numPages = 0 %}
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<p><strong>{{ post.date | date: "%b %-d, %Y" }}</strong></p>
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{{ post.content }}
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<p>
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{% if numPages == 0 %}
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<a href="{{ site.baseurl }}/#download" class="btn btn-primary" role="button">Download latest version {{ post.version }}</a>
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{% else %}
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<a href="https://github.com/Cibiv/IQ-TREE/releases/tag/v{{ post.version }}" class="btn btn-primary" role="button">Download version {{ post.version }} from GitHub</a>
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{% endif %}
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</p><br>
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{% assign numPages = numPages | plus: 1 %}
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{% endfor %}

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