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Expand file tree Collapse file tree Original file line number Diff line number Diff line change 3737 run : |
3838 pip install -U setuptools
3939 pip install -U wheel
40- # install pycortex from source to avoid using the cached wheel
41- pip install git+https://github.com/gallantlab/pycortex .git
40+ # install himalaya from source to get early testing
41+ pip install git+https://github.com/gallantlab/himalaya .git
4242 pip install -e ."[github]"
4343 $CONDA/bin/conda install -c conda-forge git-annex=*=alldep*
4444
7272
7373 - name : Run some tutorials
7474 run : |
75- # do not run all tutorials because it is slow on CPU
76- python tutorials/shortclips/00_download_shortclips.py
77- python tutorials/shortclips/01_plot_explainable_variance.py
78- python tutorials/shortclips/02_plot_ridge_regression.py
79- python tutorials/shortclips/03_plot_wordnet_model.py
75+ # run tutorials with a shortcut option to skip model fitting
76+ HIMALAYA_SKIP_FIT=True python tutorials/shortclips/00_download_shortclips.py
77+ HIMALAYA_SKIP_FIT=True python tutorials/shortclips/01_plot_explainable_variance.py
78+ HIMALAYA_SKIP_FIT=True python tutorials/shortclips/02_plot_ridge_regression.py
79+ HIMALAYA_SKIP_FIT=True python tutorials/shortclips/03_plot_wordnet_model.py
80+ HIMALAYA_SKIP_FIT=True python tutorials/shortclips/04_plot_hemodynamic_response.py
81+ HIMALAYA_SKIP_FIT=True python tutorials/shortclips/05_plot_motion_energy_model.py
82+ HIMALAYA_SKIP_FIT=True python tutorials/shortclips/06_plot_banded_ridge_model.py
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