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Minor update to accounting script for sum of raw reads
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Lines changed: 2 additions & 2 deletions

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01_scripts/read_and_alignment_summary.R

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -22,15 +22,15 @@ head(my.data)
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my.data$percent.merged <- as.numeric(as.character(my.data$percent.merged))
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#### Summarize Raw Data ####
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sum(my.data$num.raw.reads)
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summary(my.data$num.raw)
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sd(my.data$num.raw.reads)
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#### Summarize Merged Data ####
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sum(my.data$num.merged.reads)
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summary(my.data$percent.merged)
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sd(my.data$percent.merged)
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#### Total Merged Reads ####
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sum(my.data$num.merged.reads)
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#### Percent Merged Reads ####
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sum(my.data$num.merged.reads) / sum(my.data$num.raw.reads) * 100

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