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Comprehensive_Loop-Caller_Benchmark

BCC Score

bcc_score.py to calculate the BCC Score This script is includes the main formula to calculate the BCC Score with the corresponding categorical scores. This also includes MinMax normalization and scaling formula used in our manuscript.

Results

chromosomeloops.xlsx includes all the raw results from our analysis

Tools Script

.sh scripts includes one shot running commands for every individual tools

Plot Script

.ipynb scripts includes all the python code used for figure generation in our manuscript.