all the updates

Author: IAlibay

AUTHORS

@@ -18,4 +18,7 @@ Chronological list of authors
 2020
 
   - Lily Wang (@lilyminium)
-  
+ 
+2023
+
+  - Irfan Alibay (@IAlibay) 

CHANGELOG.md

@@ -4,6 +4,11 @@ All notable changes to this project will be documented in this file.
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## [0.9.0] - ????-??-??
+
+### Changes
+- Update package to only support NEP29 range (Python 3.9 - 3.12 as of writing)
+
 ## [0.8.1] - 2021-10-04
 
 ### Added

MDAnalysisData/__init__.py

@@ -3,8 +3,6 @@
 # Modelled after sklearn.datasets
 # https://github.com/scikit-learn/scikit-learn/tree/0.20.X/sklearn/datasets
 
-from __future__ import absolute_import
-
 __all__ = ['datasets']
 
 from . import datasets

MDAnalysisData/base.py

@@ -24,10 +24,7 @@
 # Code taken from sklearn/utils/ and sklearn/datasets under the 'New BSD license'
 # https://github.com/scikit-learn/scikit-learn/blob/master/COPYING and adapted
 
-
-from __future__ import print_function
-
-from six.moves.urllib.request import urlretrieve
+from urllib.request import urlretrieve
 
 import shutil
 from collections import namedtuple

MDAnalysisData/datasets.py

@@ -3,9 +3,6 @@
 """
 # import load_* and fetch_* functions from modules
 
-from __future__ import absolute_import
-
-
 from .base import get_data_home, clear_data_home
 from .adk_equilibrium import fetch_adk_equilibrium
 from .adk_transitions import (fetch_adk_transitions_DIMS,

MDAnalysisData/tests/test_base.py

@@ -1,15 +1,7 @@
 # -*- coding: utf-8 -*-
 
-from __future__ import absolute_import, division
-
-from six.moves.urllib.request import urlretrieve
-
-try:
-    import pathlib
-except ImportError:
-    # Python 2.7
-    import pathlib2 as pathlib
-
+from urllib.request import urlretrieve
+import pathlib
 import os
 import os.path
 

MDAnalysisData/tests/test_datasets.py

@@ -8,8 +8,6 @@
 # that are quick to install but slow to download do not benefit from caching,
 # as they take as long to download from the cache as from the original source."
 
-from __future__ import absolute_import, division
-
 import os.path
 import glob
 

MDAnalysisData/tests/test_package_metadata.py

@@ -1,8 +1,7 @@
 # -*- coding: utf-8 -*-
 
 import sys
-import six
-from six.moves import reload_module
+from importlib import reload
 import pytest
 
 import MDAnalysisData
@@ -21,12 +20,12 @@ def test_default_authors(monkeypatch):
     with pytest.warns(UserWarning,
                       match="Could not find authors.py, __authors__ will "
                             "be the generic MDAnalysis team."):
-        reload_module(MDAnalysisData)
+        reload(MDAnalysisData)
     authors = MDAnalysisData.__authors__
     assert authors == ["The MDAnalysis Development Team"]
 
 
 def test_version():
     # very generic because versioneer will provide different strings depending
     # on the repository status
-    assert isinstance(MDAnalysisData.__version__, six.string_types)
+    assert isinstance(MDAnalysisData.__version__, str)

setup.py

@@ -15,7 +15,6 @@
 trajectories that can be used for workshops and extended tests.
 """
 
-from __future__ import print_function
 from setuptools import setup, find_packages
 import versioneer
 
@@ -117,24 +116,17 @@ def dynamic_author_list():
         'Operating System :: MacOS :: MacOS X',
         'Operating System :: Microsoft :: Windows ',
         'Programming Language :: Python',
-        'Programming Language :: Python :: 2',
-        'Programming Language :: Python :: 2.7',
         'Programming Language :: Python :: 3',
-        'Programming Language :: Python :: 3.6',
-        'Programming Language :: Python :: 3.7',
-        'Programming Language :: Python :: 3.8',
         'Programming Language :: Python :: 3.9',
+        'Programming Language :: Python :: 3.10',
+        'Programming Language :: Python :: 3.11',
+        'Programming Language :: Python :: 3.12',
         'Topic :: Scientific/Engineering',
         'Topic :: Scientific/Engineering :: Bio-Informatics',
         'Topic :: Scientific/Engineering :: Chemistry',
         'Topic :: Software Development :: Libraries :: Python Modules',
     ]
 
-    # Python 2.7 compatibility
-    test_requirements = ['pytest', 'pytest-mock']
-    if sys.version_info.major < 3:
-        test_requirements.append("pathlib2")
-
     setup(name='MDAnalysisData',
           version=versioneer.get_version(),
           cmdclass=versioneer.get_cmdclass(),
@@ -157,10 +149,8 @@ def dynamic_author_list():
           packages=find_packages(),
           package_dir={'MDAnalysisData': 'MDAnalysisData'},
           package_data={'MDAnalysisData': ['descr/*.rst']},
-          install_requires=['six',
-                            'setuptools',
-                            'tqdm',
-          ],
-          tests_require=test_requirements,
+          setup_requires=['setuptools'],
+          install_requires=['tqdm'],
+          tests_require=['pytest', 'pytest-mock'],
           zip_safe=True,
     )