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This repository was archived by the owner on Feb 19, 2026. It is now read-only.

Commit da98064

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author
Christopher Lorton
committed
Updates for EMOD v2.7 release.
1 parent c7110f8 commit da98064

21 files changed

Lines changed: 264 additions & 1751 deletions

‎SamplesInput/PFA_Extra_Rel_Rate_10M_10F.json‎

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{
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"Metadata": {
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"Author": "dbridenbecker",
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"NodeCount": 1,
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"Tool": "notepad",
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"IdReference": "0",
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"DateCreated": "2015-3-21"
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},
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"Defaults": {
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"Society" : {
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"TRANSITORY" :
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{
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"Pair_Formation_Parameters" :
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{
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"Extra_Relational_Rate_Ratio_Male": 10,
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"Extra_Relational_Rate_Ratio_Female": 10
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}
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},
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"INFORMAL" :
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{
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"Pair_Formation_Parameters" :
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{
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"Extra_Relational_Rate_Ratio_Male": 10,
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"Extra_Relational_Rate_Ratio_Female": 10
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}
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},
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"MARITAL" :
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{
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"Pair_Formation_Parameters" :
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{
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"Extra_Relational_Rate_Ratio_Male": 10,
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"Extra_Relational_Rate_Ratio_Female": 10
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}
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}
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}
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}
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}

SamplesInput_HIV/PFA_overlay_scenario_rates.json renamed to SamplesInput/PFA_Extra_Rel_Rate_4M_2F.json

Lines changed: 6 additions & 3 deletions
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@@ -12,21 +12,24 @@
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{
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"Pair_Formation_Parameters" :
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{
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"Formation_Rate_Constant": 0.0013699000000000001
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"Extra_Relational_Rate_Ratio_Male": 4,
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"Extra_Relational_Rate_Ratio_Female": 2
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}
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},
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"INFORMAL" :
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{
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"Pair_Formation_Parameters" :
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{
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"Formation_Rate_Constant": 0.0014419999999999999
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"Extra_Relational_Rate_Ratio_Male": 4,
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"Extra_Relational_Rate_Ratio_Female": 2
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}
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},
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"MARITAL" :
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{
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"Pair_Formation_Parameters" :
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{
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"Formation_Rate_Constant": 9.1323999999999995e-05
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"Extra_Relational_Rate_Ratio_Male": 4,
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"Extra_Relational_Rate_Ratio_Female": 2
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}
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}
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}

‎SamplesInput/PFA_overlay_scenario5_rates.json‎

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@@ -8,8 +8,26 @@
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},
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"Defaults": {
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"Society" : {
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"Concurrency_Configuration" :
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{
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"NONE":
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{
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"Extra_Relational_Flag_Type": "Correlated",
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"Correlated_Relationship_Type_Order" : [ "TRANSITORY", "INFORMAL", "MARITAL", "COMMERCIAL" ]
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}
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},
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"TRANSITORY" :
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{
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"Concurrency_Parameters" :
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{
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"NONE":
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{
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"Max_Simultaneous_Relationships_Female": 2,
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"Max_Simultaneous_Relationships_Male" : 4,
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"Prob_Extra_Relationship_Female" : 0.8,
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"Prob_Extra_Relationship_Male" : 0.2
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}
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},
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"Relationship_Parameters" :
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{
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"Condom_Usage_Probability" :
@@ -23,11 +41,23 @@
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"Pair_Formation_Parameters" :
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{
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"Formation_Rate_Constant": 0.0013,
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"Update_Period" : 7.0
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"Update_Period" : 7.0,
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"Extra_Relational_Rate_Ratio_Male": 5,
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"Extra_Relational_Rate_Ratio_Female": 2
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}
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},
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"INFORMAL" :
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{
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"Concurrency_Parameters" :
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{
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"NONE":
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{
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"Max_Simultaneous_Relationships_Female": 2,
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"Max_Simultaneous_Relationships_Male" : 3,
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"Prob_Extra_Relationship_Female" : 0.5,
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"Prob_Extra_Relationship_Male" : 1.0
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}
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},
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"Relationship_Parameters" :
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{
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"Condom_Usage_Probability" :
@@ -41,11 +71,23 @@
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"Pair_Formation_Parameters" :
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{
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"Formation_Rate_Constant": 0.00035,
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"Update_Period" : 7.0
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"Update_Period" : 7.0,
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"Extra_Relational_Rate_Ratio_Male": 5,
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"Extra_Relational_Rate_Ratio_Female": 2
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}
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},
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"MARITAL" :
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{
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"Concurrency_Parameters" :
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{
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"NONE":
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{
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"Max_Simultaneous_Relationships_Female": 2,
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"Max_Simultaneous_Relationships_Male" : 2,
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"Prob_Extra_Relationship_Female" : 0.5,
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"Prob_Extra_Relationship_Male" : 0.5
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}
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},
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"Relationship_Parameters" :
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{
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"Condom_Usage_Probability" :
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"Pair_Formation_Parameters" :
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{
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"Formation_Rate_Constant": 7.8171373381041601e-05,
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"Update_Period" : 30.0
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"Update_Period" : 30.0,
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"Extra_Relational_Rate_Ratio_Male": 5,
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"Extra_Relational_Rate_Ratio_Female": 2
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}
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}
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}

‎SamplesInput/pfa_overlay.json‎

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@@ -8,8 +8,27 @@
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},
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"Defaults": {
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"Society" : {
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"Concurrency_Configuration" :
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{
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"Probability_Person_Is_Behavioral_Super_Spreader" : 0,
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"Individual_Property_Name": "NONE",
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"NONE":
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{
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"Extra_Relational_Flag_Type": "Independent"
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}
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},
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"TRANSITORY" :
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{
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"Concurrency_Parameters" :
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{
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"NONE":
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{
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"Max_Simultaneous_Relationships_Female": 1,
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"Max_Simultaneous_Relationships_Male" : 1,
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"Prob_Extra_Relationship_Female" : 0,
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"Prob_Extra_Relationship_Male" : 0
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}
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},
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"Relationship_Parameters" :
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{
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"Coital_Act_Rate" : 0.33,
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"Formation_Rate_Type" : "CONSTANT",
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"Formation_Rate_Constant": 0.0027397260,
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"Update_Period" : 7,
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"Extra_Relational_Rate_Ratio_Male": 1,
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"Extra_Relational_Rate_Ratio_Female": 1,
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"Number_Age_Bins_Male" : 20,
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"Number_Age_Bins_Female" : 20,
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"Age_of_First_Bin_Edge_Male" : 17.5,
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},
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"INFORMAL" :
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{
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"Concurrency_Parameters" :
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{
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"NONE":
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{
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"Max_Simultaneous_Relationships_Female": 1,
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"Max_Simultaneous_Relationships_Male" : 1,
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"Prob_Extra_Relationship_Female" : 0,
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"Prob_Extra_Relationship_Male" : 0
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}
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},
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"Relationship_Parameters" :
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{
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"Coital_Act_Rate" : 0.33,
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"Formation_Rate_Type" : "CONSTANT",
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"Formation_Rate_Constant": 0,
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"Update_Period" : 7,
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"Extra_Relational_Rate_Ratio_Male": 1,
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"Extra_Relational_Rate_Ratio_Female": 1,
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"Number_Age_Bins_Male" : 20,
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"Number_Age_Bins_Female" : 20,
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"Age_of_First_Bin_Edge_Male" : 17.5,
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},
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"MARITAL" :
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{
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"Concurrency_Parameters" :
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{
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"NONE":
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{
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"Max_Simultaneous_Relationships_Female": 1,
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"Max_Simultaneous_Relationships_Male" : 1,
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"Prob_Extra_Relationship_Female" : 0,
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"Prob_Extra_Relationship_Male" : 0
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}
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},
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"Relationship_Parameters" :
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{
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"Coital_Act_Rate" : 0.33,
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"Formation_Rate_Type" : "CONSTANT",
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"Formation_Rate_Constant": 0,
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"Update_Period" : 14,
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"Extra_Relational_Rate_Ratio_Male": 1,
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"Extra_Relational_Rate_Ratio_Female": 1,
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"Number_Age_Bins_Male" : 20,
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"Number_Age_Bins_Female" : 20,
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"Age_of_First_Bin_Edge_Male" : 17.5,
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}
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}
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},
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"TRANSACTIONAL" :
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"COMMERCIAL" :
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{
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"Concurrency_Parameters" :
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{
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"NONE":
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{
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"Max_Simultaneous_Relationships_Female": 0,
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"Max_Simultaneous_Relationships_Male" : 0,
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"Prob_Extra_Relationship_Female" : 0,
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"Prob_Extra_Relationship_Male" : 0
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}
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},
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"Relationship_Parameters" :
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{
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"Coital_Act_Rate" : 0.33,
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"Formation_Rate_Type" : "CONSTANT",
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"Formation_Rate_Constant": 0.0,
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"Update_Period" : 7.0,
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"Extra_Relational_Rate_Ratio_Male": 1,
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"Extra_Relational_Rate_Ratio_Female": 1,
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"Number_Age_Bins_Male" : 2,
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"Number_Age_Bins_Female" : 2,
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"Age_of_First_Bin_Edge_Male" : 50,

‎SamplesInput/pfa_simple.json‎

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},
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"Defaults": {
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"Society" : {
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"Concurrency_Configuration" :
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{
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"Probability_Person_Is_Behavioral_Super_Spreader" : 0,
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"Individual_Property_Name": "NONE",
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"NONE":
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{
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"Extra_Relational_Flag_Type": "Independent"
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}
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},
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"TRANSITORY" :
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{
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"Concurrency_Parameters" :
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{
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"NONE":
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{
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"Max_Simultaneous_Relationships_Female": 1,
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"Max_Simultaneous_Relationships_Male" : 1,
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"Prob_Extra_Relationship_Female" : 0,
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"Prob_Extra_Relationship_Male" : 0
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}
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},
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"Relationship_Parameters" :
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{
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"Coital_Act_Rate" : 0.33,
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"Formation_Rate_Type" : "CONSTANT",
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"Formation_Rate_Constant": 0.0027397260,
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"Update_Period" : 7,
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"Extra_Relational_Rate_Ratio_Male": 1,
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"Extra_Relational_Rate_Ratio_Female": 1,
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"Number_Age_Bins_Male" : 1,
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"Number_Age_Bins_Female" : 1,
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"Age_of_First_Bin_Edge_Male" : 100,
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},
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"INFORMAL" :
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{
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"Concurrency_Parameters" :
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{
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"NONE":
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{
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"Max_Simultaneous_Relationships_Female": 1,
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"Max_Simultaneous_Relationships_Male" : 1,
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"Prob_Extra_Relationship_Female" : 0,
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"Prob_Extra_Relationship_Male" : 0
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}
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},
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"Relationship_Parameters" :
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{
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"Coital_Act_Rate" : 0.33,
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"Formation_Rate_Type" : "CONSTANT",
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"Formation_Rate_Constant": 0,
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"Update_Period" : 7,
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"Extra_Relational_Rate_Ratio_Male": 1,
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"Extra_Relational_Rate_Ratio_Female": 1,
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"Number_Age_Bins_Male" : 1,
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"Number_Age_Bins_Female" : 1,
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"Age_of_First_Bin_Edge_Male" : 100,
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},
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"MARITAL" :
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{
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"Concurrency_Parameters" :
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{
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"NONE":
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{
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"Max_Simultaneous_Relationships_Female": 1,
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"Max_Simultaneous_Relationships_Male" : 1,
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"Prob_Extra_Relationship_Female" : 0,
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"Prob_Extra_Relationship_Male" : 0
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}
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},
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"Relationship_Parameters" :
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{
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"Coital_Act_Rate" : 0.33,
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"Formation_Rate_Type" : "CONSTANT",
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"Formation_Rate_Constant": 0,
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"Update_Period" : 14,
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"Extra_Relational_Rate_Ratio_Male": 1,
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"Extra_Relational_Rate_Ratio_Female": 1,
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"Number_Age_Bins_Male" : 1,
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"Number_Age_Bins_Female" : 1,
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"Age_of_First_Bin_Edge_Male" : 100,
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}
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}
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},
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"TRANSACTIONAL" :
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"COMMERCIAL" :
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{
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"Concurrency_Parameters" :
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{
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"NONE":
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{
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"Max_Simultaneous_Relationships_Female": 0,
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"Max_Simultaneous_Relationships_Male" : 0,
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"Prob_Extra_Relationship_Female" : 0,
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"Prob_Extra_Relationship_Male" : 0
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}
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},
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"Relationship_Parameters" :
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{
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"Coital_Act_Rate" : 0.33,
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"Formation_Rate_Type" : "CONSTANT",
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"Formation_Rate_Constant": 0.0,
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"Update_Period" : 7.0,
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"Extra_Relational_Rate_Ratio_Male": 1,
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"Extra_Relational_Rate_Ratio_Female": 1,
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"Number_Age_Bins_Male" : 2,
148205
"Number_Age_Bins_Female" : 2,
149206
"Age_of_First_Bin_Edge_Male" : 50,

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