Updated Readme and tutorial pages

Author: JAnns98

README.md

@@ -22,22 +22,35 @@ includes performance improvements. It’s a big one!
 
 2.  **Horizontal Plots**: This new feature allows users to create
     horizontal plots instead of the regular vertical plots, providing a
-    more compact visualization of data.
+    more compact visualization of data. This can be utilized by setting
+    `horizontal=True` in the `plot()` method. See the [Horizontal
+    Plots](../tutorials/08-horizontal_plot.html) tutorial for more
+    details.
 
 3.  **Forest Plots**: This new feature allows users to create forest
     plots! Forest plots provide a simple and intuitive way to visualize
     many delta-delta (or Deltas’ g) or mini-meta effect sizes at once
     from multiple different dabest objects without presenting the raw
-    data.
+    data. See the [Forest Plots](../tutorials/07-forest_plot.html)
+    tutorial for more details.
 
-4.  **Aesthetic Updates**: We have made several aesthetic improvements
+4.  **Gridkey**: This new feature allows users to create a gridkey to
+    represent the labels of the groups in the plot. This can be utilized
+    with the `gridkey_rows` argument in the `plot()` method. See the
+    gridkey section in the [Plot
+    Aesthetics](../tutorials/09-plot_aesthetics.html) tutorial for more
+    details.
+
+5.  **Aesthetic Updates**: We have made several aesthetic improvements
     to the plots, including:
 
     - **Swarm, Contrast, and Summary bars**: We have added bars to
       better highlight the various groups and their differences. These
       bars can be customized to suit the user’s needs. The swarm and
       contrast bars are provided by default, while the summary bars can
-      be added by the user.
+      be added by the user. See the relevant sections in the [Plot
+      Aesthetics](../tutorials/09-plot_aesthetics.html) tutorial for
+      more details.
 
     - **Delta-Delta Plots**: We have modified the delta-delta plot
       format to be more compact and easier to read. The new format
@@ -50,13 +63,15 @@ includes performance improvements. It’s a big one!
 
     - **Mini-Meta Plots**: We have modified the mini-meta plot format to
       be more compact and easier to read. The new format brings the
-      mini-meta effect size closer to the regular effect sizes
+      mini-meta effect size closer to the regular effect sizes.
 
     - **Proportion Plots Sample Sizes**: We have updated the proportion
-      plots to show sample sizes for each group.
+      plots to show sample sizes for each group. These can be toggled on
+      or off via the `prop_sample_counts` parameter.
 
     - **Effect Size Lines for Paired Plots**: Effect size lines for
-      paired plots are now available.
+      paired plots are now available. These can be toggled on or off via
+      the `es_paired_lines` parameter.
 
     - **Baseline Error Curves**: Plots now include a baseline error dot
       and curve to show the error of the baseline/control group. By
@@ -74,7 +89,7 @@ includes performance improvements. It’s a big one!
       modifies the two-group swarmplots to have empty circles for the
       control group and filled circles for the experimental group.
 
-5.  **Miscellaneous Improvements & Adjustments**
+6.  **Miscellaneous Improvements & Adjustments**
 
     - **Numba for Speed Improvements**: We have included Numba to speed
       up the various calculations in DABEST. This should make the

nbs/read_me.ipynb

@@ -33,22 +33,24 @@
     "\n",
     "1. **Python 3.13 Support**: DABEST now supports Python 3.10-3.13.\n",
     "\n",
-    "1. **Horizontal Plots**: This new feature allows users to create horizontal plots instead of the regular vertical plots, providing a more compact visualization of data.\n",
+    "2. **Horizontal Plots**: This new feature allows users to create horizontal plots instead of the regular vertical plots, providing a more compact visualization of data. This can be utilized by setting `horizontal=True` in the `plot()` method. See the [Horizontal Plots](../tutorials/08-horizontal_plot.html) tutorial for more details.\n",
     "\n",
-    "2. **Forest Plots**: This new feature allows users to create forest plots! Forest plots provide a simple and intuitive way to visualize many delta-delta (or Deltas' g) or mini-meta effect sizes at once from multiple different dabest objects without presenting the raw data.\n",
+    "3. **Forest Plots**: This new feature allows users to create forest plots! Forest plots provide a simple and intuitive way to visualize many delta-delta (or Deltas' g) or mini-meta effect sizes at once from multiple different dabest objects without presenting the raw data. See the [Forest Plots](../tutorials/07-forest_plot.html) tutorial for more details.\n",
     "\n",
-    "3. **Aesthetic Updates**: We have made several aesthetic improvements to the plots, including:\n",
-    "   - **Swarm, Contrast, and Summary bars**: We have added bars to better highlight the various groups and their differences. These bars can be customized to suit the user's needs. The swarm and contrast bars are provided by default, while the summary bars can be added by the user.\n",
+    "4. **Gridkey**: This new feature allows users to create a gridkey to represent the labels of the groups in the plot. This can be utilized with the `gridkey_rows` argument in the `plot()` method. See the gridkey section in the [Plot Aesthetics](../tutorials/09-plot_aesthetics.html) tutorial for more details.\n",
+    "\n",
+    "5. **Aesthetic Updates**: We have made several aesthetic improvements to the plots, including:\n",
+    "   - **Swarm, Contrast, and Summary bars**: We have added bars to better highlight the various groups and their differences. These bars can be customized to suit the user's needs. The swarm and contrast bars are provided by default, while the summary bars can be added by the user. See the relevant sections in the [Plot Aesthetics](../tutorials/09-plot_aesthetics.html) tutorial for more details.\n",
     "  \n",
     "   - **Delta-Delta Plots**: We have modified the delta-delta plot format to be more compact and easier to read. The new format brings the delta-delta (or Deltas' g) effect size closer to the regular effect sizes. In addition, a gap has been added to the zeroline to separate the delta-delta and regular effect sizes.\n",
     "\n",
     "   - **Delta-delta Effect Sizes for Proportion Plots**: Delta-delta effect sizes for proportion plots are now available.\n",
     "  \n",
-    "   - **Mini-Meta Plots**: We have modified the mini-meta plot format to be more compact and easier to read. The new format brings the mini-meta effect size closer to the regular effect sizes\n",
+    "   - **Mini-Meta Plots**: We have modified the mini-meta plot format to be more compact and easier to read. The new format brings the mini-meta effect size closer to the regular effect sizes.\n",
     "\n",
-    "   - **Proportion Plots Sample Sizes**: We have updated the proportion plots to show sample sizes for each group.\n",
+    "   - **Proportion Plots Sample Sizes**: We have updated the proportion plots to show sample sizes for each group. These can be toggled on or off via the `prop_sample_counts` parameter.\n",
     "\n",
-    "   - **Effect Size Lines for Paired Plots**: Effect size lines for paired plots are now available.\n",
+    "   - **Effect Size Lines for Paired Plots**: Effect size lines for paired plots are now available. These can be toggled on or off via the `es_paired_lines` parameter.\n",
     "\n",
     "   - **Baseline Error Curves**: Plots now include a baseline error dot and curve to show the error of the baseline/control group. By default, the dot is shown, while the curve can be added by the user (via the `show_baseline_ec` parameter).\n",
     "\n",
@@ -57,8 +59,7 @@
     "   - **Empty Circle Color Palette**: A new swarmplot color palette modification is available for unpaired plots via the `empty_circle` parameter in the `plot()` method. This option modifies the two-group swarmplots to have empty circles for the control group and filled circles for the experimental group.\n",
     "\n",
     "\n",
-    "\n",
-    "4. **Miscellaneous Improvements & Adjustments**\n",
+    "6. **Miscellaneous Improvements & Adjustments**\n",
     "    - **Numba for Speed Improvements**: We have included Numba to speed up the various calculations in DABEST. This should make the calculations faster and more efficient. Importing DABEST may take a little longer than before, and a progress bar will appear during the import process to show the calculations being performed. Once imported, loading and plotting data should now be faster.\n",
     "  \n",
     "    - **Terminology Updates**: We have made several updates to the documentation and terminology to improve clarity and consistency. For example:\n",